Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. DXTD-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. DXTD-1 93, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygcg family protein | EJI00_19270 | Not Available | Positive | 4073300 - 4074226 | 30965.4 |
| tpm domain-containing protein | EJI00_19275 | Not Available | Positive | 4074229 - 4074747 | 19497.3 |
| hypothetical protein | EJI00_19280 | Not Available | Positive | 4074744 - 4074953 | 7231.73 |
| ligase-associated dna damage response endonuclease pdem | EJI00_19285 | Not Available | Negative | 4074862 - 4075545 | 24636.6 |
| thioredoxin trxc | EJI00_19290 | Not Available | Positive | 4075626 - 4076075 | 16275.5 |
| ligase-associated dna damage response dexh box helicase | EJI00_19295 | Not Available | Negative | 4076098 - 4078848 | 99979.9 |
| atp-dependent dna ligase | EJI00_19300 | Not Available | Negative | 4078845 - 4080500 | 61673.3 |
| ligase-associated dna damage response exonuclease | EJI00_19305 | Not Available | Negative | 4080497 - 4081618 | 39848.8 |
| duf3617 family protein | EJI00_19310 | Not Available | Negative | 4081689 - 4082201 | 17911.8 |
| gfo/idh/moca family oxidoreductase | EJI00_19320 | Not Available | Negative | 4082887 - 4084050 | 41884.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
