Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. DXTD-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. DXTD-1 93, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ku protein | EJI00_17340 | Not Available | Negative | 3660809 - 3661852 | 38038.3 |
| succinylglutamate desuccinylase | EJI00_17345 | Not Available | Negative | 3662057 - 3663055 | 35841.6 |
| hypothetical protein | EJI00_17350 | Not Available | Positive | 3663215 - 3663487 | 9698.81 |
| ribulose-phosphate 3-epimerase | EJI00_17355 | Not Available | Negative | 3663495 - 3664190 | 24509.4 |
| co2+/mg2+ efflux protein apag | EJI00_17360 | Not Available | Positive | 3664262 - 3664657 | 14216.9 |
| recombinase | EJI00_17365 | Not Available | Positive | 3664802 - 3666799 | 71720.0 |
| sodium:proton exchanger | EJI00_17370 | Not Available | Positive | 3666796 - 3668067 | 44288.4 |
| glutamate--cysteine ligase | EJI00_17375 | Not Available | Positive | 3668064 - 3669299 | 46468.2 |
| helix-turn-helix domain-containing protein | EJI00_17380 | Not Available | Negative | 3669306 - 3670283 | 35383.6 |
| isochorismatase family protein | EJI00_17385 | Not Available | Positive | 3670389 - 3671015 | 22592.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
