Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. DXTD-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. DXTD-1 93, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone deacetylase family protein | EJI00_14510 | Not Available | Negative | 3052219 - 3053265 | 37578.9 |
| ornithine cyclodeaminase | EJI00_14515 | Not Available | Negative | 3053273 - 3054322 | 37870.4 |
| excinuclease abc subunit a | EJI00_14520 | Not Available | Negative | 3054445 - 3060294 | 211530.0 |
| amino acid abc transporter substrate-binding protein | EJI00_14525 | Not Available | Positive | 3060468 - 3061574 | 38727.9 |
| amino acid abc transporter substrate-binding protein | EJI00_14530 | Not Available | Positive | 3061731 - 3062852 | 39605.0 |
| mfs transporter | EJI00_14535 | Not Available | Negative | 3063150 - 3064844 | 60893.2 |
| 2-hydroxychromene-2-carboxylate isomerase | EJI00_14540 | Not Available | Negative | 3065014 - 3065658 | 23755.4 |
| duf1289 domain-containing protein | EJI00_14545 | Not Available | Negative | 3065655 - 3065921 | 9684.49 |
| ybak/ebsc family protein | EJI00_14550 | Not Available | Negative | 3065918 - 3066406 | 17394.0 |
| hydroxymethylglutaryl-coa lyase | EJI00_14555 | Not Available | Negative | 3066438 - 3067358 | 32692.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
