Variovorax sp. DXTD-1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. DXTD-1 is a rod-shaped bacterium characterized by a single replicon. This single replicon indicates a streamlined genetic structure which may contribute to its adaptability in various environments. The accessions for this strain are cataloged under RWKH00000000.1, providing a reference for further research and characterization. The rod shape of Variovorax sp. DXTD-1 is typical of many members of the Variovorax genus, which are known for their metabolic versatility. This versatility often allows them to thrive in diverse ecological niches, potentially contributing to biogeochemical cycles. The single replicon could be advantageous, allowing for efficient replication and regulation of essential genes, which may enhance its survival and adaptability in fluctuating environmental conditions. In summary, Variovorax sp. DXTD-1, with its rod shape and single replicon, exemplifies traits that may facilitate its ecological roles, particularly in nutrient cycling and bioremediation processes. This adaptability underscores the importance of studying such microorganisms as they can play significant roles in maintaining ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. DXTD-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. DXTD-1 93, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator mrazEJI00_12950Not AvailablePositive2726103 - 272653115939.1
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhEJI00_12955Not AvailablePositive2726540 - 272746333684.2
cell division protein ftslEJI00_12960Not AvailablePositive2727460 - 272781013045.9
penicillin-binding protein 2EJI00_12965Not AvailablePositive2727807 - 272955563665.7
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseEJI00_12970Not AvailablePositive2729558 - 273112054042.3
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseEJI00_12975Not AvailablePositive2731135 - 273255949922.4
phospho-n-acetylmuramoyl-pentapeptide- transferaseEJI00_12980Not AvailablePositive2732575 - 273375343504.3
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseEJI00_12985Not AvailablePositive2733761 - 273585472662.3
putative lipid ii flippase ftswEJI00_12990Not AvailablePositive2735851 - 273714946857.0
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseEJI00_12995Not AvailablePositive2737146 - 273821037401.6

Displaying genes 2551 – 2560 of 4906 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.