Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. DXTD-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. DXTD-1 93, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerate kinase | EJI00_12700 | Not Available | Negative | 2678069 - 2678509 | 15813.4 |
| hypothetical protein | EJI00_12705 | Not Available | Positive | 2678727 - 2679182 | 15216.0 |
| dna repair protein rada | EJI00_12710 | Not Available | Negative | 2679242 - 2680633 | 48653.8 |
| homoprotocatechuate degradation operon regulator hpar | EJI00_12715 | Not Available | Positive | 2680732 - 2681166 | 16313.8 |
| fumarylacetoacetate hydrolase | EJI00_12720 | Not Available | Positive | 2681163 - 2681798 | 22376.0 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | EJI00_12725 | Not Available | Positive | 2681795 - 2682568 | 28404.8 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | EJI00_12730 | Not Available | Positive | 2682565 - 2684025 | 52455.9 |
| aromatic ring-opening dioxygenase subunit liga | EJI00_12735 | Not Available | Positive | 2684202 - 2684537 | 12359.8 |
| extradiol ring-cleavage dioxygenase | EJI00_12740 | Not Available | Positive | 2684534 - 2685364 | 30328.2 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | EJI00_12745 | Not Available | Positive | 2685378 - 2685782 | 14803.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
