Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. DXTD-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. DXTD-1 93, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | EJI00_11430 | Not Available | Positive | 2397657 - 2398571 | 32186.3 |
| trap transporter small permease | EJI00_11435 | Not Available | Positive | 2398685 - 2399266 | 21440.1 |
| trap transporter large permease | EJI00_11440 | Not Available | Positive | 2399263 - 2400561 | 45526.1 |
| dctp family trap transporter solute-binding subunit | EJI00_11445 | Not Available | Positive | 2400963 - 2402000 | 37524.7 |
| nucleoside hydrolase | EJI00_11450 | Not Available | Positive | 2402050 - 2402988 | 33526.3 |
| amino acid abc transporter atp-binding protein | EJI00_11455 | Not Available | Negative | 2403059 - 2403796 | 27075.3 |
| amino acid abc transporter permease | EJI00_11460 | Not Available | Negative | 2403830 - 2404519 | 25557.0 |
| amino acid abc transporter permease | EJI00_11465 | Not Available | Negative | 2404521 - 2405255 | 27057.6 |
| amino acid abc transporter substrate-binding protein | EJI00_11470 | Not Available | Negative | 2405392 - 2406294 | 32298.5 |
| aspartate ammonia-lyase | EJI00_11475 | Not Available | Negative | 2406467 - 2407918 | 51823.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
