Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. DXTD-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. DXTD-1 93, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone deacetylase | EJI00_10305 | Not Available | Negative | 2165160 - 2166086 | 33985.2 |
| phasin family protein | EJI00_10310 | Not Available | Positive | 2166272 - 2166823 | 18776.1 |
| 3-hydroxyacyl-coa dehydrogenase | EJI00_10315 | Not Available | Positive | 2166960 - 2167718 | 25866.4 |
| yihy/virulence factor brkb family protein | EJI00_10320 | Not Available | Negative | 2167666 - 2168607 | 34443.1 |
| dna primase | EJI00_10325 | Not Available | Positive | 2168701 - 2170683 | 72227.9 |
| rna polymerase sigma factor rpod | EJI00_10330 | Not Available | Positive | 2171021 - 2173375 | 87019.3 |
| bcr/cfla family efflux mfs transporter | EJI00_10335 | Not Available | Positive | 2173465 - 2174700 | 44420.3 |
| hpp family protein | EJI00_10340 | Not Available | Positive | 2174705 - 2175838 | 41172.3 |
| quaternary ammonium compound efflux smr transporter suge | EJI00_10345 | Not Available | Positive | 2175859 - 2176179 | 11019.0 |
| tripartite tricarboxylate transporter substrate binding protein | EJI00_10350 | Not Available | Negative | 2176190 - 2177176 | 33883.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
