Variovorax sp. DXTD-1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. DXTD-1 is a rod-shaped bacterium characterized by a single replicon. This single replicon indicates a streamlined genetic structure which may contribute to its adaptability in various environments. The accessions for this strain are cataloged under RWKH00000000.1, providing a reference for further research and characterization. The rod shape of Variovorax sp. DXTD-1 is typical of many members of the Variovorax genus, which are known for their metabolic versatility. This versatility often allows them to thrive in diverse ecological niches, potentially contributing to biogeochemical cycles. The single replicon could be advantageous, allowing for efficient replication and regulation of essential genes, which may enhance its survival and adaptability in fluctuating environmental conditions. In summary, Variovorax sp. DXTD-1, with its rod shape and single replicon, exemplifies traits that may facilitate its ecological roles, particularly in nutrient cycling and bioremediation processes. This adaptability underscores the importance of studying such microorganisms as they can play significant roles in maintaining ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. DXTD-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. DXTD-1 93, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
moxr family atpaseEJI00_09175Not AvailablePositive1927405 - 192825932493.5
hypothetical proteinEJI00_09180Not AvailablePositive1928256 - 19285078646.73
n-acetyltransferaseEJI00_09185Not AvailablePositive1928526 - 192912222216.6
vwa domain-containing proteinEJI00_09190Not AvailablePositive1929148 - 193033546122.0
outer membrane protein assembly factorEJI00_09195Not AvailablePositive1930408 - 193234570367.1
translocation/assembly module tambEJI00_09200Not AvailablePositive1932360 - 1936459143799.0
autotransporter outer membrane beta-barrel domain-containing proteinEJI00_09205Not AvailablePositive1936460 - 193757638350.9
yihy/virulence factor brkb family proteinEJI00_09210Not AvailablePositive1937751 - 193888740319.9
nudix domain-containing proteinEJI00_09215Not AvailableNegative1938903 - 193997339615.0
nad+ synthaseEJI00_09220Not AvailableNegative1939982 - 194168262082.4

Displaying genes 1811 – 1820 of 4906 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.