Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. DXTD-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. DXTD-1 93, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion system protein | EJI00_09075 | Not Available | Positive | 1903914 - 1904912 | 35557.1 |
| type ii secretion system f family protein | EJI00_09080 | Not Available | Positive | 1904909 - 1905874 | 35274.7 |
| hypothetical protein | EJI00_09085 | Not Available | Positive | 1905916 - 1906806 | 30892.8 |
| duf3613 domain-containing protein | EJI00_09090 | Not Available | Positive | 1906854 - 1907186 | 11527.2 |
| pilus assembly protein | EJI00_09095 | Not Available | Positive | 1907224 - 1907709 | 17497.2 |
| pilus assembly protein | EJI00_09100 | Not Available | Positive | 1907739 - 1908200 | 16301.7 |
| hypothetical protein | EJI00_09105 | Not Available | Positive | 1908205 - 1910205 | 69195.4 |
| sigma-54-dependent fis family transcriptional regulator | EJI00_09110 | Not Available | Positive | 1910224 - 1911654 | 52399.5 |
| tolc family protein | EJI00_09115 | Not Available | Negative | 1911670 - 1913226 | 55940.1 |
| hlyd family type i secretion periplasmic adaptor subunit | EJI00_09120 | Not Available | Negative | 1913223 - 1914539 | 47795.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
