Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. DXTD-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. DXTD-1 93, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein pilp | EJI00_00540 | Not Available | Positive | 123059 - 123601 | 20226.5 |
| type iv pilus secretin pilq | EJI00_00545 | Not Available | Positive | 123598 - 125739 | 76098.0 |
| shikimate kinase | EJI00_00550 | Not Available | Positive | 125763 - 126311 | 20114.4 |
| 3-dehydroquinate synthase | EJI00_00555 | Not Available | Positive | 126343 - 127455 | 38986.3 |
| deoxyguanosinetriphosphate triphosphohydrolase | EJI00_00560 | Not Available | Positive | 127478 - 128608 | 42564.1 |
| mfs transporter | EJI00_00565 | Not Available | Positive | 128614 - 129867 | 42084.6 |
| duf1415 domain-containing protein | EJI00_00570 | Not Available | Positive | 129864 - 130439 | 20825.6 |
| sam-dependent methyltransferase | EJI00_00575 | Not Available | Positive | 130436 - 131317 | 32416.2 |
| transposase | EJI00_00580 | Not Available | Positive | 131347 - 132042 | 25955.0 |
| glutamate synthase subunit alpha | EJI00_00585 | Not Available | Positive | 132226 - 136980 | 172908.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
