Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. DXTD-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. DXTD-1 93, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | EJI00_07025 | Not Available | Negative | 1497337 - 1498347 | 35605.9 |
| 4-hydroxyphenylpyruvate dioxygenase | EJI00_07030 | Not Available | Negative | 1498417 - 1499211 | 29089.3 |
| shikimate dehydrogenase | EJI00_07035 | Not Available | Positive | 1499412 - 1500335 | 32817.6 |
| trap transporter small permease | EJI00_07040 | Not Available | Positive | 1500391 - 1500993 | 22095.1 |
| trap transporter large permease subunit | EJI00_07045 | Not Available | Positive | 1500995 - 1502275 | 44910.5 |
| trap transporter substrate-binding protein | EJI00_07050 | Not Available | Positive | 1502328 - 1503332 | 36122.6 |
| shikimate dehydrogenase | EJI00_07055 | Not Available | Positive | 1503361 - 1504194 | 28887.0 |
| 3-carboxy-cis,cis-muconate cycloisomerase | EJI00_07060 | Not Available | Positive | 1504294 - 1505505 | 42464.1 |
| carboxymuconolactone decarboxylase | EJI00_07065 | Not Available | Positive | 1505502 - 1505930 | 15764.0 |
| bcr/cfla family efflux mfs transporter | EJI00_07070 | Not Available | Positive | 1505927 - 1507150 | 42801.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
