Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. DXTD-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. DXTD-1 93, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome biogenesis protein ccsb | EJI00_00490 | Not Available | Positive | 112921 - 114237 | 48985.3 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | EJI00_00495 | Not Available | Positive | 114356 - 115366 | 37367.9 |
| sulfoxide reductase heme-binding subunit yedz | EJI00_00500 | Not Available | Positive | 115395 - 116069 | 25039.3 |
| diaminopimelate decarboxylase | EJI00_00505 | Not Available | Negative | 116106 - 117392 | 45942.2 |
| hypothetical protein | EJI00_00510 | Not Available | Negative | 117389 - 117616 | 7036.39 |
| iron donor protein cyay | EJI00_00515 | Not Available | Positive | 117680 - 118012 | 12090.0 |
| penicillin-binding protein 1a | EJI00_00520 | Not Available | Negative | 118024 - 120354 | 84496.0 |
| pilus assembly protein pilm | EJI00_00525 | Not Available | Positive | 120677 - 121756 | 39024.8 |
| fimbrial protein | EJI00_00530 | Not Available | Positive | 121753 - 122373 | 22752.5 |
| pilus assembly protein pilo | EJI00_00535 | Not Available | Positive | 122382 - 123062 | 25245.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
