Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. DXTD-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. DXTD-1 93, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI00_06925 | Not Available | Positive | 1473175 - 1474242 | 39807.0 |
| duf3396 domain-containing protein | EJI00_06930 | Not Available | Positive | 1474242 - 1475561 | 50445.3 |
| hypothetical protein | EJI00_06935 | Not Available | Positive | 1475833 - 1476336 | 18475.8 |
| type vi secretion system lipoprotein tssj | EJI00_06940 | Not Available | Positive | 1476610 - 1477125 | 18985.9 |
| type vi secretion system baseplate subunit tssk | EJI00_06945 | Not Available | Positive | 1477283 - 1478662 | 50901.1 |
| dotu family type vi secretion system protein | EJI00_06950 | Not Available | Positive | 1478671 - 1480065 | 49889.6 |
| type vi secretion system membrane subunit tssm | EJI00_06955 | Not Available | Positive | 1480065 - 1483700 | 134597.0 |
| type vi secretion system-associated protein tagf | EJI00_06960 | Not Available | Positive | 1483702 - 1484424 | 26141.7 |
| serine/threonine protein kinase | EJI00_06965 | Not Available | Positive | 1484456 - 1486543 | 72950.6 |
| hypothetical protein | EJI00_06970 | Not Available | Negative | 1486536 - 1486853 | 11008.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
