Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. DXTD-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. DXTD-1 93, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system atpase tssh | EJI00_06870 | Not Available | Positive | 1456416 - 1459166 | 98899.4 |
| type vi secretion system tip protein vgrg | EJI00_06875 | Not Available | Positive | 1459187 - 1461580 | 88730.7 |
| hypothetical protein | EJI00_06880 | Not Available | Positive | 1461628 - 1462011 | 13994.3 |
| pentapeptide repeat-containing protein | EJI00_06885 | Not Available | Positive | 1462068 - 1464668 | 94440.1 |
| pentapeptide repeat-containing protein | EJI00_06890 | Not Available | Positive | 1464665 - 1465717 | 38260.0 |
| duf3540 domain-containing protein | EJI00_06895 | Not Available | Positive | 1465752 - 1466414 | 23796.5 |
| duf4150 domain-containing protein | EJI00_06900 | Not Available | Positive | 1466429 - 1466821 | 13740.1 |
| serine/threonine-protein phosphatase | EJI00_06905 | Not Available | Negative | 1466831 - 1467643 | 29060.0 |
| type vi secretion system-associated fha domain protein tagh | EJI00_06910 | Not Available | Negative | 1467636 - 1469579 | 67946.8 |
| hypothetical protein | EJI00_06915 | Not Available | Negative | 1469629 - 1470033 | 14840.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
