Aquibium carbonis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Aquibium

Description

Aquibium carbonis is characterized by having a single replicon, which indicates a relatively simple genomic architecture. The organism is cataloged under the accession number RWKW00000000.1, providing a reference for researchers interested in its genetic and genomic attributes. The streamlined genomic structure may suggest efficient replication and potentially a focused adaptation to specific ecological niches. In the context of its ecological role, Aquibium carbonis may be involved in carbon cycling within its environment. Microorganisms with such traits often play crucial roles in biogeochemical processes, contributing to the degradation of organic matter and facilitating nutrient cycling. Overall, the defining trait of having one replicon alongside its accession number helps situate Aquibium carbonis within the broader microbial landscape, hinting at its potential significance in ecological processes, particularly in carbon dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusAquibium
SpeciesAquibium carbonis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aquibium carbonis strain B2.3 NODE_334_length_694, whole genome

Gene Summary

Adenine Count

908637 bp

Thymine Count

907303 bp

Guanine Count

1762970 bp

Cytosine Count

1768727 bp

Genome Length

5362415 bp

Protein-coding Genes

4987 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
coproporphyrinogen iii oxidaseEJC49_00375Not AvailablePositive77698 - 7885842517.4
type ii toxin-antitoxin system phd/yefm family antitoxinEJC49_00380Not AvailablePositive78948 - 792179918.73
type ii toxin-antitoxin system vapc family toxinEJC49_00385Not AvailablePositive79214 - 7963915710.0
16s rrna (cytidine(1402)-2'-o)-methyltransferaseEJC49_00390Not AvailablePositive79663 - 8054131149.6
yran family proteinEJC49_00395Not AvailablePositive80531 - 8090814196.3
cyclase family proteinEJC49_00400Not AvailablePositive80984 - 8181729541.2
glucose-methanol-choline oxidoreductaseEJC49_00405Not AvailablePositive81917 - 8352757531.5
hypothetical proteinEJC49_00410Not AvailableNegative83770 - 8413913160.7
protein tolrEJC49_00415Not AvailableNegative84145 - 8459716383.0
protein tolqEJC49_00420Not AvailableNegative84613 - 8532325437.3

Displaying genes 81 – 90 of 5041 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.