Aquibium carbonis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Aquibium

Description

Aquibium carbonis is characterized by having a single replicon, which indicates a relatively simple genomic architecture. The organism is cataloged under the accession number RWKW00000000.1, providing a reference for researchers interested in its genetic and genomic attributes. The streamlined genomic structure may suggest efficient replication and potentially a focused adaptation to specific ecological niches. In the context of its ecological role, Aquibium carbonis may be involved in carbon cycling within its environment. Microorganisms with such traits often play crucial roles in biogeochemical processes, contributing to the degradation of organic matter and facilitating nutrient cycling. Overall, the defining trait of having one replicon alongside its accession number helps situate Aquibium carbonis within the broader microbial landscape, hinting at its potential significance in ecological processes, particularly in carbon dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusAquibium
SpeciesAquibium carbonis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aquibium carbonis strain B2.3 NODE_334_length_694, whole genome

Gene Summary

Adenine Count

908637 bp

Thymine Count

907303 bp

Guanine Count

1762970 bp

Cytosine Count

1768727 bp

Genome Length

5362415 bp

Protein-coding Genes

4987 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseEJC49_02130Not AvailablePositive418186 - 41970954336.0
3,4-dihydroxyphenylacetate 2,3-dioxygenaseEJC49_02135Not AvailablePositive419789 - 42076937445.4
faa hydrolase family proteinEJC49_02140Not AvailablePositive420816 - 42169132191.1
2-oxo-hepta-3-ene-1,7-dioic acid hydrataseEJC49_02145Not AvailablePositive421691 - 42249428574.4
prolyl-trna synthetase associated domain-containing proteinEJC49_02150Not AvailablePositive422585 - 42308517617.3
thioredoxinEJC49_02155Not AvailablePositive423129 - 42409133693.0
atp-dependent proteaseEJC49_02160Not AvailablePositive424344 - 42501524737.8
trm112 family proteinEJC49_02165Not AvailablePositive425025 - 4252407868.55
dna polymerase iii subunit alphaEJC49_02170Not AvailableNegative425290 - 428667125843.0
2-isopropylmalate synthaseEJC49_02175Not AvailablePositive429960 - 43170864281.3

Displaying genes 431 – 440 of 5041 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.