Aquibium carbonis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Aquibium

Description

Aquibium carbonis is characterized by having a single replicon, which indicates a relatively simple genomic architecture. The organism is cataloged under the accession number RWKW00000000.1, providing a reference for researchers interested in its genetic and genomic attributes. The streamlined genomic structure may suggest efficient replication and potentially a focused adaptation to specific ecological niches. In the context of its ecological role, Aquibium carbonis may be involved in carbon cycling within its environment. Microorganisms with such traits often play crucial roles in biogeochemical processes, contributing to the degradation of organic matter and facilitating nutrient cycling. Overall, the defining trait of having one replicon alongside its accession number helps situate Aquibium carbonis within the broader microbial landscape, hinting at its potential significance in ecological processes, particularly in carbon dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusAquibium
SpeciesAquibium carbonis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aquibium carbonis strain B2.3 NODE_334_length_694, whole genome

Gene Summary

Adenine Count

908637 bp

Thymine Count

907303 bp

Guanine Count

1762970 bp

Cytosine Count

1768727 bp

Genome Length

5362415 bp

Protein-coding Genes

4987 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
maf-like proteinEJC49_02075Not AvailableNegative405988 - 40658721224.7
kinase/pyrophosphorylaseEJC49_02080Not AvailableNegative406618 - 40743930025.1
uroporphyrinogen decarboxylaseEJC49_02085Not AvailablePositive407844 - 40886937451.2
protoporphyrinogen oxidase hemjEJC49_02090Not AvailablePositive408872 - 40940519797.8
transcription termination factor rhoEJC49_02095Not AvailablePositive409548 - 41081347097.0
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeEJC49_02100Not AvailablePositive410925 - 41226247777.8
para family proteinEJC49_02110Not AvailablePositive414876 - 41567628642.9
parb/repb/spo0j family partition proteinEJC49_02115Not AvailablePositive415709 - 41658731889.1
dna polymerase iii subunit deltaEJC49_02120Not AvailableNegative416589 - 41762937357.3
5-carboxymethyl-2-hydroxymuconate delta-isomeraseEJC49_02125Not AvailablePositive417784 - 41817614348.2

Displaying genes 421 – 430 of 5041 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.