Aquibium carbonis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Aquibium

Description

Aquibium carbonis is characterized by having a single replicon, which indicates a relatively simple genomic architecture. The organism is cataloged under the accession number RWKW00000000.1, providing a reference for researchers interested in its genetic and genomic attributes. The streamlined genomic structure may suggest efficient replication and potentially a focused adaptation to specific ecological niches. In the context of its ecological role, Aquibium carbonis may be involved in carbon cycling within its environment. Microorganisms with such traits often play crucial roles in biogeochemical processes, contributing to the degradation of organic matter and facilitating nutrient cycling. Overall, the defining trait of having one replicon alongside its accession number helps situate Aquibium carbonis within the broader microbial landscape, hinting at its potential significance in ecological processes, particularly in carbon dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusAquibium
SpeciesAquibium carbonis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aquibium carbonis strain B2.3 NODE_334_length_694, whole genome

Gene Summary

Adenine Count

908637 bp

Thymine Count

907303 bp

Guanine Count

1762970 bp

Cytosine Count

1768727 bp

Genome Length

5362415 bp

Protein-coding Genes

4987 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ll-diaminopimelate aminotransferaseEJC49_10535Not AvailablePositive2217535 - 221875544649.6
lyttr family transcriptional regulatorEJC49_10545Not AvailableNegative2220158 - 222100030395.5
duf2306 domain-containing proteinEJC49_10550Not AvailablePositive2221037 - 222154918665.6
class ii fructose-bisphosphataseEJC49_10555Not AvailablePositive2221688 - 222266534426.5
single-stranded-dna-specific exonuclease recjEJC49_10560Not AvailablePositive2222750 - 222452563002.0
patatin family proteinEJC49_10565Not AvailableNegative2224547 - 222551835024.6
phosphoribosyl-amp cyclohydrolaseEJC49_10570Not AvailableNegative2225677 - 222613216114.1
gtp cyclohydrolase i foleEJC49_10575Not AvailableNegative2226166 - 222680423554.5
iron-sulfur cluster assembly scaffold proteinEJC49_10580Not AvailablePositive2227045 - 222749115887.9
nucleotidyltransferaseEJC49_10585Not AvailablePositive2227507 - 222779110437.5

Displaying genes 2081 – 2090 of 5041 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.