Aquibium carbonis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Aquibium

Description

Aquibium carbonis is characterized by having a single replicon, which indicates a relatively simple genomic architecture. The organism is cataloged under the accession number RWKW00000000.1, providing a reference for researchers interested in its genetic and genomic attributes. The streamlined genomic structure may suggest efficient replication and potentially a focused adaptation to specific ecological niches. In the context of its ecological role, Aquibium carbonis may be involved in carbon cycling within its environment. Microorganisms with such traits often play crucial roles in biogeochemical processes, contributing to the degradation of organic matter and facilitating nutrient cycling. Overall, the defining trait of having one replicon alongside its accession number helps situate Aquibium carbonis within the broader microbial landscape, hinting at its potential significance in ecological processes, particularly in carbon dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusAquibium
SpeciesAquibium carbonis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aquibium carbonis strain B2.3 NODE_334_length_694, whole genome

Gene Summary

Adenine Count

908637 bp

Thymine Count

907303 bp

Guanine Count

1762970 bp

Cytosine Count

1768727 bp

Genome Length

5362415 bp

Protein-coding Genes

4987 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tol-pal system-associated acyl-coa thioesteraseEJC49_00425Not AvailableNegative85542 - 8600317512.8
glycosyl hydrolaseEJC49_00430Not AvailablePositive86066 - 8733146873.4
holliday junction branch migration dna helicase ruvbEJC49_00435Not AvailableNegative87359 - 8839637894.0
pin domain-containing proteinEJC49_00440Not AvailableNegative88471 - 8888115268.4
abrb/maze/spovt family dna-binding domain-containing proteinEJC49_00445Not AvailableNegative88881 - 8916510510.2
holliday junction branch migration protein ruvaEJC49_00450Not AvailableNegative89224 - 8984421462.1
bcr/cfla family efflux mfs transporterEJC49_00455Not AvailableNegative89951 - 9118042390.6
marr family transcriptional regulatorEJC49_00460Not AvailableNegative91177 - 9165017066.6
m3 family peptidaseEJC49_00465Not AvailablePositive91795 - 9383475196.7
aldo/keto reductaseEJC49_00470Not AvailablePositive93951 - 9493435732.7

Displaying genes 91 – 100 of 5041 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.