Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TF3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
771033 bp
Thymine Count
780004 bp
Guanine Count
1425542 bp
Cytosine Count
1405637 bp
Genome Length
4388508 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phzf family phenazine biosynthesis protein | EJC47_03745 | Not Available | Negative | 846171 - 847004 | 29319.8 |
| cation diffusion facilitator family transporter | EJC47_03750 | Not Available | Negative | 847001 - 847945 | 33819.8 |
| pyridoxamine 5'-phosphate oxidase | EJC47_03755 | Not Available | Negative | 847942 - 848520 | 21929.4 |
| ku protein | EJC47_03760 | Not Available | Positive | 848630 - 849499 | 31784.3 |
| dna ligase d | EJC47_03765 | Not Available | Positive | 849623 - 852094 | 89898.1 |
| potassium transporter kup | EJC47_03770 | Not Available | Negative | 852110 - 854053 | 69001.2 |
| ligase-associated dna damage response endonuclease pdem | EJC47_03775 | Not Available | Positive | 854191 - 854853 | 23857.7 |
| peptide-methionine (s)-s-oxide reductase | EJC47_03780 | Not Available | Negative | 854870 - 855523 | 23358.6 |
| deda family protein | EJC47_03785 | Not Available | Negative | 855611 - 856240 | 22568.1 |
| ribose-5-phosphate isomerase rpia | EJC47_03790 | Not Available | Positive | 856860 - 857528 | 23021.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
