Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TF3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
771033 bp
Thymine Count
780004 bp
Guanine Count
1425542 bp
Cytosine Count
1405637 bp
Genome Length
4388508 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | EJC47_01275 | Not Available | Positive | 307281 - 307937 | 24185.1 |
| hypothetical protein | EJC47_01280 | Not Available | Negative | 307951 - 308433 | 16558.2 |
| hupe/urej family protein | EJC47_01285 | Not Available | Negative | 308433 - 309014 | 19313.5 |
| duf4198 domain-containing protein | EJC47_01290 | Not Available | Positive | 309218 - 310045 | 30240.3 |
| lytic transglycosylase domain-containing protein | EJC47_01295 | Not Available | Positive | 310122 - 310736 | 21545.7 |
| type vi secretion protein | EJC47_01300 | Not Available | Positive | 310733 - 311068 | 10996.7 |
| type vi secretion protein | EJC47_01305 | Not Available | Positive | 311065 - 311352 | 10849.5 |
| virb4 family type iv secretion/conjugal transfer atpase | EJC47_01310 | Not Available | Positive | 311356 - 313728 | 87167.2 |
| type iv secretion system protein | EJC47_01315 | Not Available | Positive | 313734 - 314957 | 42405.1 |
| type iv secretion system protein | EJC47_01320 | Not Available | Positive | 314954 - 315694 | 26913.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
