Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TF3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
771033 bp
Thymine Count
780004 bp
Guanine Count
1425542 bp
Cytosine Count
1405637 bp
Genome Length
4388508 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | EJC47_10620 | Not Available | Positive | 2184641 - 2185774 | 39470.6 |
| set domain-containing protein-lysine n-methyltransferase | EJC47_10625 | Not Available | Positive | 2185885 - 2187030 | 42255.8 |
| pas domain s-box protein | EJC47_10630 | Not Available | Negative | 2187027 - 2189981 | 106290.0 |
| indoleamine 2,3-dioxygenase | EJC47_10635 | Not Available | Positive | 2190154 - 2191320 | 42748.9 |
| threonine synthase | EJC47_10640 | Not Available | Negative | 2191341 - 2192573 | 44103.2 |
| hypothetical protein | EJC47_10645 | Not Available | Negative | 2192563 - 2193342 | 28581.2 |
| nucleotide exchange factor grpe | EJC47_10650 | Not Available | Negative | 2193525 - 2194079 | 20171.9 |
| heat-inducible transcriptional repressor hrca | EJC47_10655 | Not Available | Negative | 2194097 - 2195140 | 36934.7 |
| tonb family protein | EJC47_10660 | Not Available | Negative | 2195222 - 2195971 | 25287.1 |
| ribonuclease ph | EJC47_10665 | Not Available | Positive | 2196068 - 2196784 | 25455.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
