Flammeovirga pectinis

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Flammeovirgaceae

Genus

Flammeovirga

Description

Flammeovirga pectinis is a Gram-negative, rod-shaped bacterium. This organism is characterized by having a single replicon, which is indicative of its genetic structure and replication mechanism. The genomic sequence of Flammeovirga pectinis can be accessed through the accession number NZ_CP034562.1, providing a resource for further research and analysis. While specific ecological roles or biological activities of Flammeovirga pectinis have not been detailed in the provided traits, its classification as a member of the Flammeovirga genus suggests that it may play a role in the degradation of complex organic materials, potentially contributing to nutrient cycling in its natural habitat. Such bacteria are often found in environments where organic matter is abundant, indicating that they may be significant in processes such as composting or sediment turnover. In summary, Flammeovirga pectinis, with its distinct Gram-negative and rod-shaped characteristics, as well as its single replicon, represents a microbial entity of interest within its ecosystem, likely involved in ecological processes related to organic matter decomposition. Further exploration of its genomic data may reveal more about its specific functions and contributions to environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFlammeovirgaceae
GenusFlammeovirga
SpeciesFlammeovirga pectinis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flammeovirga pectinis strain L12M1 chromosome 1, complete

Gene Summary

Adenine Count

1768362 bp

Thymine Count

1759280 bp

Guanine Count

839227 bp

Cytosine Count

840907 bp

Genome Length

5207776 bp

Protein-coding Genes

4029 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase/3'-5' exonuclease polxEI427_RS18470Not AvailablePositive4669127 - 467081562905.3
duf5606 domain-containing proteinEI427_RS18475Not AvailableNegative4670897 - 467133416153.2
dna-directed rna polymerase subunit betaEI427_RS18480Not AvailableNegative4671585 - 4675457145643.0
tlpa family protein disulfide reductaseEI427_RS18485Not AvailableNegative4675688 - 467627222073.7
hypothetical proteinEI427_RS18490Not AvailableNegative4676338 - 467679617388.4
outer membrane beta-barrel proteinEI427_RS18495Not AvailableNegative4676830 - 467741121747.6
duf4136 domain-containing proteinEI427_RS18500Not AvailableNegative4677438 - 467813624982.1
neutral/alkaline non-lysosomal ceramidase n-terminal domain-containing proteinEI427_RS18505Not AvailablePositive4678289 - 467963850205.9
transcription termination factor rhoEI427_RS18510Not AvailablePositive4679839 - 468163567082.1
cyclic nucleotide-binding domain-containing proteinEI427_RS18515Not AvailablePositive4681869 - 4685243129587.0

Displaying genes 3721 – 3730 of 4150 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.