Flammeovirga pectinis

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Flammeovirgaceae

Genus

Flammeovirga

Description

Flammeovirga pectinis is a Gram-negative, rod-shaped bacterium. This organism is characterized by having a single replicon, which is indicative of its genetic structure and replication mechanism. The genomic sequence of Flammeovirga pectinis can be accessed through the accession number NZ_CP034562.1, providing a resource for further research and analysis. While specific ecological roles or biological activities of Flammeovirga pectinis have not been detailed in the provided traits, its classification as a member of the Flammeovirga genus suggests that it may play a role in the degradation of complex organic materials, potentially contributing to nutrient cycling in its natural habitat. Such bacteria are often found in environments where organic matter is abundant, indicating that they may be significant in processes such as composting or sediment turnover. In summary, Flammeovirga pectinis, with its distinct Gram-negative and rod-shaped characteristics, as well as its single replicon, represents a microbial entity of interest within its ecosystem, likely involved in ecological processes related to organic matter decomposition. Further exploration of its genomic data may reveal more about its specific functions and contributions to environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFlammeovirgaceae
GenusFlammeovirga
SpeciesFlammeovirga pectinis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flammeovirga pectinis strain L12M1 chromosome 1, complete

Gene Summary

Adenine Count

1768362 bp

Thymine Count

1759280 bp

Guanine Count

839227 bp

Cytosine Count

840907 bp

Genome Length

5207776 bp

Protein-coding Genes

4029 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tmem175 family proteinEI427_RS13850Not AvailableNegative3454712 - 345533824010.9
sdr family nad(p)-dependent oxidoreductaseEI427_RS13855Not AvailableNegative3455397 - 345619726762.2
ldh family oxidoreductaseEI427_RS13860Not AvailableNegative3456266 - 345741141029.4
sdr family nad(p)-dependent oxidoreductaseEI427_RS13865Not AvailableNegative3457499 - 345826926923.2
arginase family proteinEI427_RS13870Not AvailableNegative3458303 - 345946643014.1
sigma-54-dependent transcriptional regulatorEI427_RS13875Not AvailableNegative3459895 - 346177272504.8
pathogenesis-related transcriptional factor and erf proteinEI427_RS13880Not AvailablePositive3462127 - 346267221068.5
had family hydrolaseEI427_RS13885Not AvailableNegative3463099 - 346383628158.0
5s ribosomal rnaNot AvailableNot AvailablePositive3464127 - 3464238Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive3464362 - 3467238Not Available

Displaying genes 2791 – 2800 of 4150 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.