Flammeovirga pectinis

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Flammeovirgaceae

Genus

Flammeovirga

Description

Flammeovirga pectinis is a Gram-negative, rod-shaped bacterium. This organism is characterized by having a single replicon, which is indicative of its genetic structure and replication mechanism. The genomic sequence of Flammeovirga pectinis can be accessed through the accession number NZ_CP034562.1, providing a resource for further research and analysis. While specific ecological roles or biological activities of Flammeovirga pectinis have not been detailed in the provided traits, its classification as a member of the Flammeovirga genus suggests that it may play a role in the degradation of complex organic materials, potentially contributing to nutrient cycling in its natural habitat. Such bacteria are often found in environments where organic matter is abundant, indicating that they may be significant in processes such as composting or sediment turnover. In summary, Flammeovirga pectinis, with its distinct Gram-negative and rod-shaped characteristics, as well as its single replicon, represents a microbial entity of interest within its ecosystem, likely involved in ecological processes related to organic matter decomposition. Further exploration of its genomic data may reveal more about its specific functions and contributions to environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFlammeovirgaceae
GenusFlammeovirga
SpeciesFlammeovirga pectinis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flammeovirga pectinis strain L12M1 chromosome 1, complete

Gene Summary

Adenine Count

1768362 bp

Thymine Count

1759280 bp

Guanine Count

839227 bp

Cytosine Count

840907 bp

Genome Length

5207776 bp

Protein-coding Genes

4029 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cryptochrome/deoxyribodipyrimidine photo-lyase family proteinEI427_RS06325Not AvailableNegative1571086 - 157255857831.2
tigr03643 family proteinEI427_RS06330Not AvailableNegative1572590 - 157287411312.7
acetate/propionate family kinaseEI427_RS06335Not AvailableNegative1573003 - 157421143597.5
phosphate acetyltransferaseEI427_RS06340Not AvailableNegative1574332 - 157642576009.3
rid family detoxifying hydrolaseEI427_RS06345Not AvailableNegative1576533 - 157691313877.6
hpt domain-containing proteinEI427_RS06350Not AvailableNegative1576994 - 157735613832.5
sigma-54 interaction domain-containing proteinEI427_RS06355Not AvailableNegative1577373 - 157868650410.7
carbonic anhydrase family proteinEI427_RS06360Not AvailableNegative1578823 - 157958428695.9
aspartate kinaseEI427_RS06365Not AvailablePositive1579882 - 158120748411.1
n-acetylmuramoyl-l-alanine amidaseEI427_RS06370Not AvailablePositive1581585 - 158291051142.9

Displaying genes 1281 – 1290 of 4150 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.