Microbacterium sp. RG1

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. RG1 is a rod-shaped bacterium characterized by the presence of a single replicon. Its genomic information is cataloged under the accession number NZ_CP034121.1. Microbacterium species are known for their diverse ecological roles, often found in soil, water, and as part of the microbiota of plants and animals. They are generally recognized for their ability to degrade various organic compounds, which can have implications for biogeochemical cycling in their environments. This characteristic may contribute to their ecological significance, particularly in nutrient recycling and soil health. The single replicon indicates that Microbacterium sp. RG1 possesses a streamlined genetic organization, which can be advantageous for its adaptability and survival in various environments. Overall, the traits of Microbacterium sp. RG1 suggest potential applications in bioremediation and environmental microbiology, where its ability to metabolize organic compounds may be harnessed for ecological benefit.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. RG1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. RG1 chromosome, complete genome.

Gene Summary

Adenine Count

493829 bp

Thymine Count

496136 bp

Guanine Count

1129929 bp

Cytosine Count

1128099 bp

Genome Length

3247993 bp

Protein-coding Genes

3119 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxal kinase pdxyEHF32_RS04080Not AvailableNegative858231 - 85908230306.1
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeEHF32_RS04085Not AvailableNegative859090 - 86043647592.8
pyridoxal 5'-phosphate synthase lyase subunit pdxsEHF32_RS04090Not AvailablePositive860522 - 86141230753.0
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtEHF32_RS04095Not AvailablePositive861402 - 86200421534.1
yebc/pmpr family dna-binding transcriptional regulatorEHF32_RS04100Not AvailablePositive862046 - 86280427023.7
crossover junction endodeoxyribonuclease ruvcEHF32_RS04105Not AvailablePositive862866 - 86343219658.6
holliday junction branch migration protein ruvaEHF32_RS04110Not AvailablePositive863479 - 86409320646.0
holliday junction branch migration dna helicase ruvbEHF32_RS04115Not AvailablePositive864086 - 86511436869.5
preprotein translocase subunit yajcEHF32_RS04120Not AvailablePositive865195 - 86565016716.7
protein translocase subunit secdEHF32_RS04125Not AvailablePositive865689 - 86743461250.2

Displaying genes 821 – 830 of 3174 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.