Microbacterium sp. RG1

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. RG1 is a rod-shaped bacterium characterized by the presence of a single replicon. Its genomic information is cataloged under the accession number NZ_CP034121.1. Microbacterium species are known for their diverse ecological roles, often found in soil, water, and as part of the microbiota of plants and animals. They are generally recognized for their ability to degrade various organic compounds, which can have implications for biogeochemical cycling in their environments. This characteristic may contribute to their ecological significance, particularly in nutrient recycling and soil health. The single replicon indicates that Microbacterium sp. RG1 possesses a streamlined genetic organization, which can be advantageous for its adaptability and survival in various environments. Overall, the traits of Microbacterium sp. RG1 suggest potential applications in bioremediation and environmental microbiology, where its ability to metabolize organic compounds may be harnessed for ecological benefit.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. RG1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. RG1 chromosome, complete genome.

Gene Summary

Adenine Count

493829 bp

Thymine Count

496136 bp

Guanine Count

1129929 bp

Cytosine Count

1128099 bp

Genome Length

3247993 bp

Protein-coding Genes

3119 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEHF32_RS05570Not AvailableNegative1158077 - 11583048608.09
cpbp family intramembrane glutamic endopeptidaseEHF32_RS05575Not AvailableNegative1158301 - 115915530140.0
amino acid permeaseEHF32_RS05580Not AvailablePositive1159374 - 116087353064.1
phosphodiester glycosidase family proteinEHF32_RS05585Not AvailablePositive1160987 - 116200335948.2
bifunctional glycosyltransferase family 2/gtra family proteinEHF32_RS05590Not AvailablePositive1162007 - 116316140879.4
duf4956 domain-containing proteinEHF32_RS05595Not AvailablePositive1163158 - 116379922657.7
polyphosphate polymerase domain-containing proteinEHF32_RS05600Not AvailablePositive1163796 - 116463830780.5
carbohydrate-binding domain-containing proteinEHF32_RS05605Not AvailablePositive1164623 - 116617349898.6
glycoside hydrolase family 28 proteinEHF32_RS05610Not AvailableNegative1166236 - 116771449866.0
siderophore-interacting proteinEHF32_RS05615Not AvailableNegative1167775 - 116865032205.4

Displaying genes 1121 – 1130 of 3174 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.