Chitinophaga lutea

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga lutea is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, which is indicative of its genomic structure and may influence its replication and genetic stability. The organism is cataloged under the accession number RPDH00000000.1, which provides a reference for its genomic information in biological databases. As a member of the Chitinophaga genus, C. lutea is likely involved in the degradation of chitin, a biopolymer found in the exoskeletons of arthropods and the cell walls of some fungi. This ecological role suggests that C. lutea may contribute to nutrient cycling in its environment, particularly in ecosystems where chitin-rich materials are abundant. By breaking down chitin, C. lutea may facilitate the recycling of organic matter and support soil health. The understanding of C. lutea's traits can provide insights into its potential applications in biotechnology, particularly in waste management or soil bioremediation, where the breakdown of chitinous materials is beneficial. Further research into its metabolic capabilities and environmental interactions could enhance our knowledge of its ecological significance and utility.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga lutea
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga lutea strain ZY74 NODE_4_length_5105_cov_78.716553,

Gene Summary

Adenine Count

1520955 bp

Thymine Count

1525811 bp

Guanine Count

1771701 bp

Cytosine Count

1791343 bp

Genome Length

6610013 bp

Protein-coding Genes

5299 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molecular chaperone dnajEGT74_22835Not AvailablePositive5542456 - 554361942088.9
methyltransferase domain-containing proteinEGT74_22840Not AvailablePositive5543716 - 554466036860.1
sodium:solute symporterEGT74_22845Not AvailablePositive5544705 - 554608449413.6
duf3520 domain-containing proteinEGT74_22850Not AvailableNegative5546141 - 554791065314.4
hypoxanthine phosphoribosyltransferaseEGT74_22855Not AvailableNegative5547981 - 554851419898.1
lysm peptidoglycan-binding domain-containing proteinEGT74_22860Not AvailableNegative5548525 - 554992251804.4
o-methyltransferaseEGT74_22865Not AvailableNegative5549946 - 555058723848.8
tigr00730 family rossman fold proteinEGT74_22870Not AvailableNegative5550859 - 555155726375.6
sodium:solute symporterEGT74_22875Not AvailableNegative5551576 - 555305154394.7
tigr03364 family fad-dependent oxidoreductaseEGT74_22880Not AvailableNegative5553225 - 555435241075.5

Displaying genes 4591 – 4600 of 5391 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.