Chitinophaga lutea

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga lutea is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, which is indicative of its genomic structure and may influence its replication and genetic stability. The organism is cataloged under the accession number RPDH00000000.1, which provides a reference for its genomic information in biological databases. As a member of the Chitinophaga genus, C. lutea is likely involved in the degradation of chitin, a biopolymer found in the exoskeletons of arthropods and the cell walls of some fungi. This ecological role suggests that C. lutea may contribute to nutrient cycling in its environment, particularly in ecosystems where chitin-rich materials are abundant. By breaking down chitin, C. lutea may facilitate the recycling of organic matter and support soil health. The understanding of C. lutea's traits can provide insights into its potential applications in biotechnology, particularly in waste management or soil bioremediation, where the breakdown of chitinous materials is beneficial. Further research into its metabolic capabilities and environmental interactions could enhance our knowledge of its ecological significance and utility.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga lutea
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga lutea strain ZY74 NODE_4_length_5105_cov_78.716553,

Gene Summary

Adenine Count

1520955 bp

Thymine Count

1525811 bp

Guanine Count

1771701 bp

Cytosine Count

1791343 bp

Genome Length

6610013 bp

Protein-coding Genes

5299 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
susc/raga family tonb-linked outer membrane proteinEGT74_08045Not AvailablePositive1990192 - 1993146105940.0
ragb/susd family nutrient uptake outer membrane proteinEGT74_08050Not AvailablePositive1993166 - 199471057161.3
duf4968 domain-containing proteinEGT74_08055Not AvailablePositive1994811 - 199723791404.1
(2fe-2s)-binding proteinEGT74_08060Not AvailableNegative1997374 - 199771212935.3
gtpase hflxEGT74_08065Not AvailableNegative1997713 - 199890346022.4
s9 family peptidaseEGT74_08070Not AvailablePositive1999005 - 200101474696.4
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomeraseEGT74_08075Not AvailablePositive2001025 - 200180127840.6
port family proteinEGT74_08080Not AvailableNegative2001871 - 200257525451.7
pas domain s-box proteinEGT74_08085Not AvailablePositive2002828 - 2005788111636.0
hamp domain-containing proteinEGT74_08090Not AvailableNegative2005903 - 200758262191.8

Displaying genes 1651 – 1660 of 5391 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.