Chitinophaga lutea

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga lutea is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, which is indicative of its genomic structure and may influence its replication and genetic stability. The organism is cataloged under the accession number RPDH00000000.1, which provides a reference for its genomic information in biological databases. As a member of the Chitinophaga genus, C. lutea is likely involved in the degradation of chitin, a biopolymer found in the exoskeletons of arthropods and the cell walls of some fungi. This ecological role suggests that C. lutea may contribute to nutrient cycling in its environment, particularly in ecosystems where chitin-rich materials are abundant. By breaking down chitin, C. lutea may facilitate the recycling of organic matter and support soil health. The understanding of C. lutea's traits can provide insights into its potential applications in biotechnology, particularly in waste management or soil bioremediation, where the breakdown of chitinous materials is beneficial. Further research into its metabolic capabilities and environmental interactions could enhance our knowledge of its ecological significance and utility.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga lutea
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga lutea strain ZY74 NODE_4_length_5105_cov_78.716553,

Gene Summary

Adenine Count

1520955 bp

Thymine Count

1525811 bp

Guanine Count

1771701 bp

Cytosine Count

1791343 bp

Genome Length

6610013 bp

Protein-coding Genes

5299 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ragb/susd family nutrient uptake outer membrane proteinEGT74_00340Not AvailableNegative98588 - 9997352160.6
susc/raga family tonb-linked outer membrane proteinEGT74_00345Not AvailableNegative99943 - 103233120835.0
hypothetical proteinEGT74_00350Not AvailablePositive103320 - 1035569596.48
rna polymerase sigma factorEGT74_00355Not AvailableNegative103700 - 10430223644.8
duf4974 domain-containing proteinEGT74_00360Not AvailableNegative104749 - 10587641751.7
voc family proteinEGT74_00365Not AvailablePositive106206 - 10660114877.8
qace family quaternary ammonium compound efflux smr transporterEGT74_00370Not AvailableNegative106676 - 10700511774.0
crp/fnr family transcriptional regulatorEGT74_00375Not AvailableNegative107077 - 10764321584.1
signal peptidase iEGT74_00380Not AvailableNegative107747 - 10891944977.7
duf2075 domain-containing proteinEGT74_00385Not AvailablePositive108999 - 11090370771.2

Displaying genes 121 – 130 of 5391 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.