Pseudorhodobacter sp. E13

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pseudorhodobacter

Description

Pseudorhodobacter sp. E13 is a Gram-negative bacterium characterized by its rod shape. This organism is notable for possessing a single replicon, which is an important trait that can influence its genetic stability and replication dynamics. The genomic information for Pseudorhodobacter sp. E13 is available under the accession number RPEN00000000.1. Gram-negative bacteria, such as Pseudorhodobacter sp. E13, are known for their unique cell wall structure, which includes an outer membrane comprising lipopolysaccharides. This structural feature can confer certain advantages, such as increased resistance to antibiotics and environmental stresses compared to Gram-positive bacteria. The ecological role of Pseudorhodobacter sp. E13 may be significant, as members of the Pseudorhodobacter genus are often associated with various environments, including marine ecosystems, where they can contribute to nutrient cycling and interact with other microorganisms. The specific ecological interactions of Pseudorhodobacter sp. E13 are not detailed but understanding its traits can provide insights into its potential roles in its native habitat. In summary, Pseudorhodobacter sp. E13 is a Gram-negative, rod-shaped bacterium with a single replicon, and its traits suggest a potential ecological role in nutrient cycling within its environment. Further research could elucidate its specific interactions and contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPseudorhodobacter
SpeciesPseudorhodobacter sp. E13
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudorhodobacter sp. E13 587, whole genome shotgun sequence.

Gene Summary

Adenine Count

757870 bp

Thymine Count

751508 bp

Guanine Count

1179858 bp

Cytosine Count

1190606 bp

Genome Length

3891850 bp

Protein-coding Genes

3669 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c oxidase subunit iiEGN72_16625Not AvailableNegative3369288 - 337013330510.7
metalloprotease tlddEGN72_16630Not AvailablePositive3370311 - 337173249621.4
hypothetical proteinEGN72_16635Not AvailablePositive3371732 - 337213614453.0
hypothetical proteinEGN72_16640Not AvailableNegative3372505 - 337280710793.5
transcription antitermination factor nusbEGN72_16645Not AvailableNegative3372880 - 337335617868.3
6,7-dimethyl-8-ribityllumazine synthaseEGN72_16650Not AvailableNegative3373353 - 337387418215.7
3,4-dihydroxy-2-butanone-4-phosphate synthaseEGN72_16655Not AvailableNegative3373878 - 337497839256.2
phosphonate abc transporter, permease protein phneEGN72_16660Not AvailableNegative3375064 - 337587029363.8
phosphonate abc transporter, permease protein phneEGN72_16665Not AvailableNegative3375867 - 337666729159.7
phosphonate abc transporter atp-binding proteinEGN72_16670Not AvailableNegative3376664 - 337748530149.3

Displaying genes 3281 – 3290 of 3774 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.