Pseudorhodobacter sp. E13

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pseudorhodobacter

Description

Pseudorhodobacter sp. E13 is a Gram-negative bacterium characterized by its rod shape. This organism is notable for possessing a single replicon, which is an important trait that can influence its genetic stability and replication dynamics. The genomic information for Pseudorhodobacter sp. E13 is available under the accession number RPEN00000000.1. Gram-negative bacteria, such as Pseudorhodobacter sp. E13, are known for their unique cell wall structure, which includes an outer membrane comprising lipopolysaccharides. This structural feature can confer certain advantages, such as increased resistance to antibiotics and environmental stresses compared to Gram-positive bacteria. The ecological role of Pseudorhodobacter sp. E13 may be significant, as members of the Pseudorhodobacter genus are often associated with various environments, including marine ecosystems, where they can contribute to nutrient cycling and interact with other microorganisms. The specific ecological interactions of Pseudorhodobacter sp. E13 are not detailed but understanding its traits can provide insights into its potential roles in its native habitat. In summary, Pseudorhodobacter sp. E13 is a Gram-negative, rod-shaped bacterium with a single replicon, and its traits suggest a potential ecological role in nutrient cycling within its environment. Further research could elucidate its specific interactions and contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPseudorhodobacter
SpeciesPseudorhodobacter sp. E13
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudorhodobacter sp. E13 587, whole genome shotgun sequence.

Gene Summary

Adenine Count

757870 bp

Thymine Count

751508 bp

Guanine Count

1179858 bp

Cytosine Count

1190606 bp

Genome Length

3891850 bp

Protein-coding Genes

3669 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1850 domain-containing proteinEGN72_16525Not AvailablePositive3350733 - 335109512561.1
l-2-hydroxyglutarate oxidaseEGN72_16530Not AvailablePositive3351197 - 335240242500.2
sensor histidine kinaseEGN72_16535Not AvailablePositive3352399 - 335415662019.0
sigma-54-dependent fis family transcriptional regulatorEGN72_16540Not AvailablePositive3354153 - 335544846167.7
staphylolytic protease preproenzyme lasaEGN72_16545Not AvailableNegative3355458 - 335622826859.0
n-acetyltransferaseEGN72_16550Not AvailableNegative3356280 - 335676817816.5
s-methyl-5'-thioadenosine phosphorylaseEGN72_16555Not AvailablePositive3356932 - 335781030839.1
nad-dependent epimerase/dehydratase family proteinEGN72_16560Not AvailablePositive3357681 - 335909049285.8
duf2269 domain-containing proteinEGN72_16565Not AvailablePositive3359090 - 335956617412.7
adenine phosphoribosyltransferaseEGN72_16570Not AvailablePositive3359578 - 336011119212.5

Displaying genes 3261 – 3270 of 3774 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.