Gordonia oryzae

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia oryzae is a notable bacterium characterized by the presence of flagella, which suggests motility in its natural environment. This motility may play a role in the bacterium's ability to navigate through various substrates or environments, potentially impacting its ecological interactions. The organism is defined by a single replicon, indicating a streamlined genome organization that may contribute to its adaptability and efficiency in various conditions. The genome of Gordonia oryzae is cataloged under the accession number RKMH00000000.1, which provides a reference point for researchers interested in studying its genetic makeup and related characteristics. Understanding the traits of Gordonia oryzae can provide insights into its ecological niche. The presence of flagella may facilitate its colonization in diverse habitats, particularly in environments where movement towards nutrients or away from harmful substances is beneficial. Additionally, the single replicon structure might suggest a capability for rapid growth and reproduction, which could be advantageous in fluctuating ecological conditions. In summary, Gordonia oryzae exemplifies important microbial traits such as motility and genomic simplicity that can influence its ecological role, potentially aiding in its survival and adaptation in various environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia oryzae strain RS15-1S NODE_72_length_5517_cov_447.34,

Gene Summary

Adenine Count

765812 bp

Thymine Count

757691 bp

Guanine Count

1492484 bp

Cytosine Count

1503810 bp

Genome Length

4522147 bp

Protein-coding Genes

3794 genes

Non-Coding Genes

171 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nine proteinEF294_04140Not AvailablePositive834896 - 83531814698.8
duf2752 domain-containing proteinEF294_04145Not AvailablePositive835346 - 83575614446.2
arsenate reductase (glutaredoxin)EF294_04155Not AvailableNegative836620 - 83696112656.0
mfs transporterEF294_04160Not AvailableNegative836972 - 83814739624.8
ribose-phosphate diphosphokinaseEF294_04165Not AvailableNegative838258 - 83923535204.2
bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmuEF294_04170Not AvailableNegative839315 - 84081751154.4
sdr family oxidoreductaseEF294_04175Not AvailablePositive841029 - 84178425556.4
Trna-glnNot AvailableNot AvailablePositive841911 - 841985Not Available
helix-turn-helix domain-containing proteinEF294_04185Not AvailablePositive842243 - 84303128733.8
para family proteinEF294_04190Not AvailablePositive843371 - 84399421871.5

Displaying genes 851 – 860 of 3965 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.