Phytobacter sp. MRY16-398

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Phytobacter

Description

Phytobacter sp. MRY16-398 is an aerobic bacterium characterized by its two replicons, which is notable for its genetic organization. The organism has been documented in the GenBank with the accession numbers NZ_AP018757.1 and NZ_AP018756.1, indicating its genetic information is accessible for research and study. Aerobic bacteria like Phytobacter sp. MRY16-398 require oxygen for their growth and metabolism, positioning them in ecosystems where oxygen is readily available. The presence of two replicons suggests a complex genomic structure, which may contribute to its adaptability and functionality in various environments. This trait can be significant for understanding how the organism interacts with its surroundings and other microorganisms. Biologically, the aerobic nature of Phytobacter sp. MRY16-398 highlights its potential role in nutrient cycling and organic matter decomposition in its habitat. Aerobic bacteria often contribute to the breakdown of organic materials, facilitating the release of nutrients back into the ecosystem. This process is essential for maintaining soil health and supporting plant growth, thereby playing a critical role in ecological balance. The genomic data associated with this species can help further elucidate its functions and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusPhytobacter
SpeciesPhytobacter sp. MRY16-398
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Phytobacter sp. MRY16-398
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phytobacter sp. MRY16-398 chromosome, complete genome.

Gene Summary

Adenine Count

1388397 bp

Thymine Count

1390167 bp

Guanine Count

1570059 bp

Cytosine Count

1570545 bp

Genome Length

5919168 bp

Protein-coding Genes

5175 genes

Non-Coding Genes

605 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yicc/yloc family endoribonucleaseMRY16398_RS00560Not AvailableNegative114965 - 11582833138.7
ribonuclease phMRY16398_RS00565Not AvailablePositive115953 - 11666925131.1
orotate phosphoribosyltransferaseMRY16398_RS00570Not AvailablePositive116881 - 11752223629.4
nucleoid occlusion factor slmaMRY16398_RS00575Not AvailableNegative117604 - 11820022847.7
dutp diphosphataseMRY16398_RS00580Not AvailableNegative118320 - 11877816178.6
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabcMRY16398_RS00585Not AvailableNegative118756 - 11996743027.9
radc family proteinMRY16398_RS00590Not AvailablePositive120140 - 12080825038.5
50s ribosomal protein l28MRY16398_RS00595Not AvailablePositive121024 - 1212609023.02
50s ribosomal protein l33MRY16398_RS00600Not AvailablePositive121281 - 1214486371.94
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyaseMRY16398_RS00605Not AvailablePositive121638 - 12244730300.9

Displaying genes 711 – 720 of 6020 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.