Phytobacter sp. MRY16-398

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Phytobacter

Description

Phytobacter sp. MRY16-398 is an aerobic bacterium characterized by its two replicons, which is notable for its genetic organization. The organism has been documented in the GenBank with the accession numbers NZ_AP018757.1 and NZ_AP018756.1, indicating its genetic information is accessible for research and study. Aerobic bacteria like Phytobacter sp. MRY16-398 require oxygen for their growth and metabolism, positioning them in ecosystems where oxygen is readily available. The presence of two replicons suggests a complex genomic structure, which may contribute to its adaptability and functionality in various environments. This trait can be significant for understanding how the organism interacts with its surroundings and other microorganisms. Biologically, the aerobic nature of Phytobacter sp. MRY16-398 highlights its potential role in nutrient cycling and organic matter decomposition in its habitat. Aerobic bacteria often contribute to the breakdown of organic materials, facilitating the release of nutrients back into the ecosystem. This process is essential for maintaining soil health and supporting plant growth, thereby playing a critical role in ecological balance. The genomic data associated with this species can help further elucidate its functions and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusPhytobacter
SpeciesPhytobacter sp. MRY16-398
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Phytobacter sp. MRY16-398
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phytobacter sp. MRY16-398 chromosome, complete genome.

Gene Summary

Adenine Count

1388397 bp

Thymine Count

1390167 bp

Guanine Count

1570059 bp

Cytosine Count

1570545 bp

Genome Length

5919168 bp

Protein-coding Genes

5175 genes

Non-Coding Genes

605 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i 3-dehydroquinate dehydrataseMRY16398_RS24225Not AvailablePositive4959019 - 495977427702.8
lysr family transcriptional regulatorMRY16398_RS24230Not AvailableNegative4959810 - 496070634127.1
mfs transporterMRY16398_RS24235Not AvailablePositive4960935 - 496224548068.5
sugar efflux transporterMRY16398_RS24240Not AvailableNegative4962288 - 496346642519.7
glucose uptake inhibitor sgrtMRY16398_RS24245Not AvailableNegative4963567 - 49637196025.36
hth-type transcriptional regulator sgrrMRY16398_RS24250Not AvailablePositive4963807 - 496546264117.6
thiamine abc transporter substrate binding subunitMRY16398_RS24255Not AvailablePositive4965672 - 496665536269.3
thiamine/thiamine pyrophosphate abc transporter permease thipMRY16398_RS24260Not AvailablePositive4966631 - 496824159112.0
thiamine abc transporter atp-binding protein thiqMRY16398_RS24265Not AvailablePositive4968225 - 496892025190.8
deda family proteinMRY16398_RS24270Not AvailableNegative4968913 - 496967728464.1

Displaying genes 4921 – 4930 of 6020 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.