Phytobacter sp. MRY16-398

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Phytobacter

Description

Phytobacter sp. MRY16-398 is an aerobic bacterium characterized by its two replicons, which is notable for its genetic organization. The organism has been documented in the GenBank with the accession numbers NZ_AP018757.1 and NZ_AP018756.1, indicating its genetic information is accessible for research and study. Aerobic bacteria like Phytobacter sp. MRY16-398 require oxygen for their growth and metabolism, positioning them in ecosystems where oxygen is readily available. The presence of two replicons suggests a complex genomic structure, which may contribute to its adaptability and functionality in various environments. This trait can be significant for understanding how the organism interacts with its surroundings and other microorganisms. Biologically, the aerobic nature of Phytobacter sp. MRY16-398 highlights its potential role in nutrient cycling and organic matter decomposition in its habitat. Aerobic bacteria often contribute to the breakdown of organic materials, facilitating the release of nutrients back into the ecosystem. This process is essential for maintaining soil health and supporting plant growth, thereby playing a critical role in ecological balance. The genomic data associated with this species can help further elucidate its functions and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusPhytobacter
SpeciesPhytobacter sp. MRY16-398
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Phytobacter sp. MRY16-398
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phytobacter sp. MRY16-398 chromosome, complete genome.

Gene Summary

Adenine Count

1388397 bp

Thymine Count

1390167 bp

Guanine Count

1570059 bp

Cytosine Count

1570545 bp

Genome Length

5919168 bp

Protein-coding Genes

5175 genes

Non-Coding Genes

605 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family oxidoreductaseMRY16398_RS12470Not AvailablePositive2539563 - 254034226547.2
vit family proteinMRY16398_RS12475Not AvailablePositive2540798 - 254148723873.0
duf1348 family proteinMRY16398_RS12480Not AvailableNegative2541722 - 254219818990.2
tetr/acrr family transcriptional regulatorMRY16398_RS12485Not AvailableNegative2542257 - 254282621106.3
formate dehydrogenase-n subunit alphaMRY16398_RS12490Not AvailablePositive2543187 - 2546237113127.0
formate dehydrogenase subunit betaMRY16398_RS12495Not AvailablePositive2546250 - 254713732337.4
formate dehydrogenase-n subunit gammaMRY16398_RS12500Not AvailablePositive2547130 - 254778325294.8
atp-grasp fold amidoligase family proteinMRY16398_RS12505Not AvailablePositive2547975 - 254888935348.7
sensor histidine kinaseMRY16398_RS12510Not AvailableNegative2548900 - 254997639923.3
response regulatorMRY16398_RS12515Not AvailableNegative2549973 - 255067726497.0

Displaying genes 2871 – 2880 of 6020 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.