Epilithonimonas vandammei

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Epilithonimonas

Description

Epilithonimonas vandammei is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is notable for having a single replicon, which is an important aspect of its genomic structure. The accession number for its genomic data is NZ_CP034160.1, providing a reference for researchers seeking to study its genetic and biochemical properties further. As a member of the bacterial domain, Epilithonimonas vandammei contributes to the microbial diversity in its environment. While specific ecological roles are not detailed in the provided data, Gram-negative bacteria often play significant roles in nutrient cycling and interactions within their ecosystems. Their adaptability and metabolic versatility allow them to thrive in various habitats, potentially influencing microbial community dynamics. Overall, Epilithonimonas vandammei exemplifies the complexity and diversity of microbial life, highlighting the importance of studying such organisms to understand ecosystem functions and interactions. Further research into its specific ecological roles could provide insights into its contributions to environmental processes and microbial community structures.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusEpilithonimonas
SpeciesEpilithonimonas vandammei
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Epilithonimonas vandammei strain H6466 chromosome, complete

Gene Summary

Adenine Count

1084085 bp

Thymine Count

1072644 bp

Guanine Count

619817 bp

Cytosine Count

591040 bp

Genome Length

3367586 bp

Protein-coding Genes

3145 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
c-type cytochromeEIB75_RS04225Not AvailablePositive877566 - 87794613716.7
23s rrna (adenine(1618)-n(6))-methyltransferase rlmfEIB75_RS04230Not AvailablePositive877956 - 87887935360.4
hypothetical proteinEIB75_RS16005Not AvailableNegative878901 - 8790686492.58
lysine--trna ligaseEIB75_RS04235Not AvailablePositive879354 - 88115068214.8
glutamate synthase large subunitEIB75_RS04240Not AvailablePositive881694 - 886226168569.0
glutamate synthase subunit betaEIB75_RS04245Not AvailablePositive886226 - 88765353329.5
dna topoisomerase (atp-hydrolyzing) subunit bEIB75_RS04250Not AvailablePositive887869 - 88980372030.7
rsiv family proteinEIB75_RS04255Not AvailablePositive889901 - 89069230674.5
duf6526 family proteinEIB75_RS04260Not AvailablePositive890694 - 89114317678.5
diacylglycerol/lipid kinase family proteinEIB75_RS04265Not AvailablePositive891306 - 89215432445.2

Displaying genes 891 – 900 of 3247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
MeningitisCausesPMC11205806
CellulitisCausesPMC11205806
SepsisCausesPMC11205806

Displaying health effects 1 – 3 of 3 in total