Epilithonimonas vandammei

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Epilithonimonas

Description

Epilithonimonas vandammei is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is notable for having a single replicon, which is an important aspect of its genomic structure. The accession number for its genomic data is NZ_CP034160.1, providing a reference for researchers seeking to study its genetic and biochemical properties further. As a member of the bacterial domain, Epilithonimonas vandammei contributes to the microbial diversity in its environment. While specific ecological roles are not detailed in the provided data, Gram-negative bacteria often play significant roles in nutrient cycling and interactions within their ecosystems. Their adaptability and metabolic versatility allow them to thrive in various habitats, potentially influencing microbial community dynamics. Overall, Epilithonimonas vandammei exemplifies the complexity and diversity of microbial life, highlighting the importance of studying such organisms to understand ecosystem functions and interactions. Further research into its specific ecological roles could provide insights into its contributions to environmental processes and microbial community structures.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusEpilithonimonas
SpeciesEpilithonimonas vandammei
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Epilithonimonas vandammei strain H6466 chromosome, complete

Gene Summary

Adenine Count

1084085 bp

Thymine Count

1072644 bp

Guanine Count

619817 bp

Cytosine Count

591040 bp

Genome Length

3367586 bp

Protein-coding Genes

3145 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha/beta fold hydrolaseEIB75_RS02470Not AvailablePositive484444 - 48521729558.3
rlua family pseudouridine synthaseEIB75_RS02475Not AvailablePositive485217 - 48590926017.6
outer membrane beta-barrel proteinEIB75_RS02480Not AvailableNegative485964 - 48812382252.5
rna polymerase sigma factorEIB75_RS02485Not AvailablePositive488239 - 48881422380.7
hypothetical proteinEIB75_RS02490Not AvailablePositive488877 - 48927516092.6
aconitate hydrataseEIB75_RS02495Not AvailableNegative489376 - 49164682895.6
bifunctional aconitate hydratase 2/2-methylisocitrate dehydrataseEIB75_RS02500Not AvailableNegative491929 - 494709101411.0
duf2752 domain-containing proteinEIB75_RS16460Not AvailablePositive494987 - 49541216642.0
wg repeat-containing proteinEIB75_RS02510Not AvailablePositive495426 - 49608825848.8
tonb-dependent receptorEIB75_RS02515Not AvailablePositive496325 - 49842779368.5

Displaying genes 541 – 550 of 3247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
MeningitisCausesPMC11205806
CellulitisCausesPMC11205806
SepsisCausesPMC11205806

Displaying health effects 1 – 3 of 3 in total