Epilithonimonas vandammei

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Epilithonimonas

Description

Epilithonimonas vandammei is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is notable for having a single replicon, which is an important aspect of its genomic structure. The accession number for its genomic data is NZ_CP034160.1, providing a reference for researchers seeking to study its genetic and biochemical properties further. As a member of the bacterial domain, Epilithonimonas vandammei contributes to the microbial diversity in its environment. While specific ecological roles are not detailed in the provided data, Gram-negative bacteria often play significant roles in nutrient cycling and interactions within their ecosystems. Their adaptability and metabolic versatility allow them to thrive in various habitats, potentially influencing microbial community dynamics. Overall, Epilithonimonas vandammei exemplifies the complexity and diversity of microbial life, highlighting the importance of studying such organisms to understand ecosystem functions and interactions. Further research into its specific ecological roles could provide insights into its contributions to environmental processes and microbial community structures.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusEpilithonimonas
SpeciesEpilithonimonas vandammei
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Epilithonimonas vandammei strain H6466 chromosome, complete

Gene Summary

Adenine Count

1084085 bp

Thymine Count

1072644 bp

Guanine Count

619817 bp

Cytosine Count

591040 bp

Genome Length

3367586 bp

Protein-coding Genes

3145 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3945 domain-containing proteinEIB75_RS12310Not AvailablePositive2589261 - 259073956394.6
type ia dna topoisomeraseEIB75_RS12315Not AvailablePositive2590746 - 259282478001.4
type iv toxin-antitoxin system abiei family antitoxinEIB75_RS12320Not AvailablePositive2592943 - 259373130191.6
nucleotidyl transferase abieii/abigii toxin family proteinEIB75_RS12325Not AvailablePositive2593773 - 259465133765.0
glucose 1-dehydrogenaseEIB75_RS12330Not AvailableNegative2594734 - 259548026271.7
helix-turn-helix domain-containing proteinEIB75_RS12335Not AvailableNegative2595567 - 259646034499.8
atp-binding proteinEIB75_RS12340Not AvailablePositive2596618 - 25968579305.35
duf1896 domain-containing proteinEIB75_RS12345Not AvailablePositive2597004 - 259744116789.7
n-6 dna methylaseEIB75_RS12350Not AvailablePositive2597428 - 2602866205414.0
conjugal transfer protein mobcEIB75_RS12355Not AvailableNegative2602932 - 260492975884.6

Displaying genes 2511 – 2520 of 3247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
MeningitisCausesPMC11205806
CellulitisCausesPMC11205806
SepsisCausesPMC11205806

Displaying health effects 1 – 3 of 3 in total