Epilithonimonas vandammei

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Epilithonimonas

Description

Epilithonimonas vandammei is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is notable for having a single replicon, which is an important aspect of its genomic structure. The accession number for its genomic data is NZ_CP034160.1, providing a reference for researchers seeking to study its genetic and biochemical properties further. As a member of the bacterial domain, Epilithonimonas vandammei contributes to the microbial diversity in its environment. While specific ecological roles are not detailed in the provided data, Gram-negative bacteria often play significant roles in nutrient cycling and interactions within their ecosystems. Their adaptability and metabolic versatility allow them to thrive in various habitats, potentially influencing microbial community dynamics. Overall, Epilithonimonas vandammei exemplifies the complexity and diversity of microbial life, highlighting the importance of studying such organisms to understand ecosystem functions and interactions. Further research into its specific ecological roles could provide insights into its contributions to environmental processes and microbial community structures.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusEpilithonimonas
SpeciesEpilithonimonas vandammei
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Epilithonimonas vandammei strain H6466 chromosome, complete

Gene Summary

Adenine Count

1084085 bp

Thymine Count

1072644 bp

Guanine Count

619817 bp

Cytosine Count

591040 bp

Genome Length

3367586 bp

Protein-coding Genes

3145 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pasta domain-containing proteinEIB75_RS04960Not AvailablePositive1048139 - 104918538552.4
rlua family pseudouridine synthaseEIB75_RS04965Not AvailablePositive1049234 - 105029841123.9
porp/sprf family type ix secretion system membrane proteinEIB75_RS04970Not AvailablePositive1050318 - 105128635771.6
radical sam family heme chaperone hemwEIB75_RS04975Not AvailablePositive1051384 - 105249342734.3
glutamate racemaseEIB75_RS04980Not AvailablePositive1052726 - 105355631114.8
glucosaminidase domain-containing proteinEIB75_RS04985Not AvailableNegative1053570 - 105401616830.4
rsmd family rna methyltransferaseEIB75_RS04990Not AvailableNegative1054030 - 105459621760.9
four helix bundle proteinEIB75_RS04995Not AvailableNegative1054643 - 105502614980.3
duf3822 family proteinEIB75_RS05000Not AvailableNegative1055040 - 105575627979.4
thioredoxin family proteinEIB75_RS05005Not AvailablePositive1056073 - 105724243992.4

Displaying genes 1041 – 1050 of 3247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
MeningitisCausesPMC11205806
CellulitisCausesPMC11205806
SepsisCausesPMC11205806

Displaying health effects 1 – 3 of 3 in total