Frigoribacterium sp. PhB107

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Frigoribacterium

Description

Frigoribacterium sp. PhB107 is characterized by having a single replicon, suggesting a streamlined genomic structure. The genomic data for this organism can be accessed through the accession number RJKU00000000.1. This trait highlights its potential adaptability and efficiency in utilizing resources within its environment. The specific ecological niche or habitat of Frigoribacterium sp. PhB107 is not provided; however, the genus Frigoribacterium is often associated with cold environments, indicating that this strain may thrive in similar conditions. This adaptation could suggest an ecological role in nutrient cycling and microbial interactions in cold habitats. Understanding Frigoribacterium sp. PhB107's genomic structure and potential environmental adaptations can provide insights into its ecological significance. Its single replicon may confer advantages in stability and replication in fluctuating temperatures, which is essential for survival in cold ecosystems. Thus, the study of this bacterium could contribute to broader knowledge regarding microbial life in extreme environments and their functional roles in ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusFrigoribacterium
SpeciesFrigoribacterium sp. PhB107
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frigoribacterium sp. PhB107 Ga0304876_16, whole genome shotgun

Gene Summary

Adenine Count

477172 bp

Thymine Count

476440 bp

Guanine Count

1251742 bp

Cytosine Count

1248739 bp

Genome Length

3454477 bp

Protein-coding Genes

3133 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter membrane protein (paat family)EDF18_0418Not AvailableNegative456163 - 45682823974.0
amino acid abc transporter substrate-binding protein (paat family)EDF18_0419Not AvailableNegative456830 - 45769629826.2
uncharacterized protein with nrde domainEDF18_0420Not AvailableNegative457817 - 45856326445.1
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligaseEDF18_0421Not AvailablePositive458669 - 46001545980.8
uncharacterized membrane protein yoat (duf817 family)EDF18_0422Not AvailableNegative459975 - 46078129559.8
hypothetical proteinEDF18_0423Not AvailablePositive460958 - 46124810564.6
putative spermidine/putrescine transport system atp-binding proteinEDF18_0424Not AvailableNegative461321 - 46240338233.0
putative spermidine/putrescine transport system permease proteinEDF18_0425Not AvailableNegative462400 - 46326329742.0
putative spermidine/putrescine transport system permease proteinEDF18_0426Not AvailableNegative463260 - 46420132898.9
putative spermidine/putrescine transport system substrate-binding proteinEDF18_0427Not AvailableNegative464180 - 46531938619.9

Displaying genes 481 – 490 of 3225 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.