Frigoribacterium sp. PhB107

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Frigoribacterium

Description

Frigoribacterium sp. PhB107 is characterized by having a single replicon, suggesting a streamlined genomic structure. The genomic data for this organism can be accessed through the accession number RJKU00000000.1. This trait highlights its potential adaptability and efficiency in utilizing resources within its environment. The specific ecological niche or habitat of Frigoribacterium sp. PhB107 is not provided; however, the genus Frigoribacterium is often associated with cold environments, indicating that this strain may thrive in similar conditions. This adaptation could suggest an ecological role in nutrient cycling and microbial interactions in cold habitats. Understanding Frigoribacterium sp. PhB107's genomic structure and potential environmental adaptations can provide insights into its ecological significance. Its single replicon may confer advantages in stability and replication in fluctuating temperatures, which is essential for survival in cold ecosystems. Thus, the study of this bacterium could contribute to broader knowledge regarding microbial life in extreme environments and their functional roles in ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusFrigoribacterium
SpeciesFrigoribacterium sp. PhB107
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frigoribacterium sp. PhB107 Ga0304876_16, whole genome shotgun

Gene Summary

Adenine Count

477172 bp

Thymine Count

476440 bp

Guanine Count

1251742 bp

Cytosine Count

1248739 bp

Genome Length

3454477 bp

Protein-coding Genes

3133 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphopantetheinyl transferaseEDF18_3005Not AvailableNegative3196932 - 319764224479.1
hypothetical proteinEDF18_3006Not AvailableNegative3197679 - 319799011778.1
gluconokinase/shikimate kinaseEDF18_3007Not AvailablePositive3198285 - 319886920636.3
rimj/riml family protein n-acetyltransferaseEDF18_3008Not AvailableNegative3198980 - 319960323253.6
uncharacterized protein duf4188EDF18_3009Not AvailableNegative3199617 - 320011418050.8
merr-like dna binding proteinEDF18_3010Not AvailablePositive3200228 - 320087222841.3
emrb/qaca subfamily drug resistance transporterEDF18_3011Not AvailableNegative3200894 - 320228847298.9
atp-dependent dna ligase ligd ligase module /atp-dependent dna ligase ligd phosphoesterase module /atp-dependent dna ligase ligd polymerase moduleEDF18_3012Not AvailableNegative3202402 - 320498793940.2
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)EDF18_3013Not AvailableNegative3205148 - 320603531167.7
dna end-binding protein kuEDF18_3014Not AvailablePositive3206128 - 320713837097.5

Displaying genes 2991 – 3000 of 3225 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.