Frigoribacterium sp. PhB107

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Frigoribacterium

Description

Frigoribacterium sp. PhB107 is characterized by having a single replicon, suggesting a streamlined genomic structure. The genomic data for this organism can be accessed through the accession number RJKU00000000.1. This trait highlights its potential adaptability and efficiency in utilizing resources within its environment. The specific ecological niche or habitat of Frigoribacterium sp. PhB107 is not provided; however, the genus Frigoribacterium is often associated with cold environments, indicating that this strain may thrive in similar conditions. This adaptation could suggest an ecological role in nutrient cycling and microbial interactions in cold habitats. Understanding Frigoribacterium sp. PhB107's genomic structure and potential environmental adaptations can provide insights into its ecological significance. Its single replicon may confer advantages in stability and replication in fluctuating temperatures, which is essential for survival in cold ecosystems. Thus, the study of this bacterium could contribute to broader knowledge regarding microbial life in extreme environments and their functional roles in ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusFrigoribacterium
SpeciesFrigoribacterium sp. PhB107
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frigoribacterium sp. PhB107 Ga0304876_16, whole genome shotgun

Gene Summary

Adenine Count

477172 bp

Thymine Count

476440 bp

Guanine Count

1251742 bp

Cytosine Count

1248739 bp

Genome Length

3454477 bp

Protein-coding Genes

3133 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized membrane protein hded (duf308 family)EDF18_2895Not AvailableNegative3056468 - 305729527350.6
fatty acid desaturaseEDF18_2896Not AvailablePositive3057668 - 305878340295.3
isopentenyl-diphosphate delta-isomeraseEDF18_2897Not AvailableNegative3058858 - 305943620556.1
geranylgeranyl diphosphate synthase type iiEDF18_2898Not AvailablePositive3059455 - 306057040251.6
phytoene/squalene synthetaseEDF18_2899Not AvailablePositive3060567 - 306146932375.2
phytoene desaturaseEDF18_2900Not AvailablePositive3061466 - 306317260905.2
lycopene cyclase domain-containing proteinEDF18_2901Not AvailablePositive3063172 - 306353713501.8
lycopene cyclase domain-containing proteinEDF18_2902Not AvailablePositive3063534 - 306397414901.8
4-hydroxybenzoate polyprenyltransferaseEDF18_2903Not AvailablePositive3063971 - 306496635045.4
dna-binding marr family transcriptional regulatorEDF18_2904Not AvailableNegative3065008 - 306565523244.8

Displaying genes 2881 – 2890 of 3225 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.