Frigoribacterium sp. PhB107

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Frigoribacterium

Description

Frigoribacterium sp. PhB107 is characterized by having a single replicon, suggesting a streamlined genomic structure. The genomic data for this organism can be accessed through the accession number RJKU00000000.1. This trait highlights its potential adaptability and efficiency in utilizing resources within its environment. The specific ecological niche or habitat of Frigoribacterium sp. PhB107 is not provided; however, the genus Frigoribacterium is often associated with cold environments, indicating that this strain may thrive in similar conditions. This adaptation could suggest an ecological role in nutrient cycling and microbial interactions in cold habitats. Understanding Frigoribacterium sp. PhB107's genomic structure and potential environmental adaptations can provide insights into its ecological significance. Its single replicon may confer advantages in stability and replication in fluctuating temperatures, which is essential for survival in cold ecosystems. Thus, the study of this bacterium could contribute to broader knowledge regarding microbial life in extreme environments and their functional roles in ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusFrigoribacterium
SpeciesFrigoribacterium sp. PhB107
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frigoribacterium sp. PhB107 Ga0304876_16, whole genome shotgun

Gene Summary

Adenine Count

477172 bp

Thymine Count

476440 bp

Guanine Count

1251742 bp

Cytosine Count

1248739 bp

Genome Length

3454477 bp

Protein-coding Genes

3133 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbohydrate abc transporter membrane protein 1 (cut1 family)EDF18_2138Not AvailablePositive2271812 - 227279234108.9
carbohydrate abc transporter membrane protein 2 (cut1 family)EDF18_2139Not AvailablePositive2272795 - 227363129733.0
alpha-mannosidaseEDF18_2140Not AvailablePositive2273726 - 2276806111521.0
putative nbd/hsp70 family sugar kinaseEDF18_2141Not AvailableNegative2276970 - 227791431334.8
putative nbd/hsp70 family sugar kinaseEDF18_2142Not AvailablePositive2278253 - 227945840904.2
n,n'-diacetylchitobiose transport system substrate-binding proteinEDF18_2143Not AvailablePositive2279634 - 228096246402.4
n,n'-diacetylchitobiose transport system permease proteinEDF18_2144Not AvailablePositive2281114 - 228207635813.9
n,n'-diacetylchitobiose transport system permease proteinEDF18_2145Not AvailablePositive2282073 - 228305935184.2
hexosaminidaseEDF18_2146Not AvailablePositive2283064 - 228475561291.3
dihydroorotase/n-acyl-d-amino-acid deacylaseEDF18_2147Not AvailablePositive2284885 - 228656456862.3

Displaying genes 2131 – 2140 of 3225 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.