Frigoribacterium sp. PhB107

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Frigoribacterium

Description

Frigoribacterium sp. PhB107 is characterized by having a single replicon, suggesting a streamlined genomic structure. The genomic data for this organism can be accessed through the accession number RJKU00000000.1. This trait highlights its potential adaptability and efficiency in utilizing resources within its environment. The specific ecological niche or habitat of Frigoribacterium sp. PhB107 is not provided; however, the genus Frigoribacterium is often associated with cold environments, indicating that this strain may thrive in similar conditions. This adaptation could suggest an ecological role in nutrient cycling and microbial interactions in cold habitats. Understanding Frigoribacterium sp. PhB107's genomic structure and potential environmental adaptations can provide insights into its ecological significance. Its single replicon may confer advantages in stability and replication in fluctuating temperatures, which is essential for survival in cold ecosystems. Thus, the study of this bacterium could contribute to broader knowledge regarding microbial life in extreme environments and their functional roles in ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusFrigoribacterium
SpeciesFrigoribacterium sp. PhB107
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frigoribacterium sp. PhB107 Ga0304876_16, whole genome shotgun

Gene Summary

Adenine Count

477172 bp

Thymine Count

476440 bp

Guanine Count

1251742 bp

Cytosine Count

1248739 bp

Genome Length

3454477 bp

Protein-coding Genes

3133 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphonatase-like hydrolaseEDF18_1846Not AvailablePositive1968216 - 196897425683.6
putative phosphonate catabolism associated alcohol dehydrogenaseEDF18_1847Not AvailablePositive1968971 - 197018840487.5
gntr family transcriptional regulatorEDF18_1848Not AvailableNegative1970368 - 197111727566.5
poly-gamma-glutamate capsule biosynthesis protein capa/ywtb (metallophosphatase superfamily)EDF18_1849Not AvailableNegative1971249 - 197346877470.8
d-alanine-d-alanine ligaseEDF18_1850Not AvailableNegative1973465 - 197448134225.6
alanine racemaseEDF18_1851Not AvailableNegative1974478 - 197569842077.1
d-alanyl-d-alanine carboxypeptidase-like proteinEDF18_1852Not AvailableNegative1975695 - 197648926469.3
two-component system response regulator vanrEDF18_1853Not AvailablePositive1976577 - 197728125412.2
two-component system sensor histidine kinase vansEDF18_1854Not AvailablePositive1977274 - 197842540144.5
divalent cation transporterEDF18_1856Not AvailablePositive1978719 - 197952228075.0

Displaying genes 1841 – 1850 of 3225 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.