Frigoribacterium sp. PhB107

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Frigoribacterium

Description

Frigoribacterium sp. PhB107 is characterized by having a single replicon, suggesting a streamlined genomic structure. The genomic data for this organism can be accessed through the accession number RJKU00000000.1. This trait highlights its potential adaptability and efficiency in utilizing resources within its environment. The specific ecological niche or habitat of Frigoribacterium sp. PhB107 is not provided; however, the genus Frigoribacterium is often associated with cold environments, indicating that this strain may thrive in similar conditions. This adaptation could suggest an ecological role in nutrient cycling and microbial interactions in cold habitats. Understanding Frigoribacterium sp. PhB107's genomic structure and potential environmental adaptations can provide insights into its ecological significance. Its single replicon may confer advantages in stability and replication in fluctuating temperatures, which is essential for survival in cold ecosystems. Thus, the study of this bacterium could contribute to broader knowledge regarding microbial life in extreme environments and their functional roles in ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusFrigoribacterium
SpeciesFrigoribacterium sp. PhB107
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frigoribacterium sp. PhB107 Ga0304876_16, whole genome shotgun

Gene Summary

Adenine Count

477172 bp

Thymine Count

476440 bp

Guanine Count

1251742 bp

Cytosine Count

1248739 bp

Genome Length

3454477 bp

Protein-coding Genes

3133 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
murein dd-endopeptidase mepm/ murein hydrolase activator nlpdEDF18_1172Not AvailableNegative1246122 - 124752247077.6
putative phosphoglycerate mutaseEDF18_1173Not AvailableNegative1247793 - 124844922370.2
phosphoribulokinase/uridine kinase family proteinEDF18_1174Not AvailableNegative1248512 - 124918023539.2
membrane-associated proteinEDF18_1175Not AvailableNegative1249197 - 124986823648.6
abc-2 type transport system atp-binding proteinEDF18_1176Not AvailablePositive1250065 - 125104233707.5
abc-2 type transport system permease proteinEDF18_1177Not AvailablePositive1251039 - 125191730338.6
dha2 family lincomycin resistance protein-like mfs transporterEDF18_1178Not AvailablePositive1252151 - 125364750912.8
putative mfs family arabinose efflux permeaseEDF18_1179Not AvailablePositive1253777 - 125525852942.3
hydroxyethylthiazole kinase-like uncharacterized protein yjefEDF18_1180Not AvailableNegative1255318 - 125603123476.0
pimeloyl-acp methyl ester carboxylesteraseEDF18_1181Not AvailablePositive1256336 - 125713328422.6

Displaying genes 1171 – 1180 of 3225 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.