Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Yersiniaceae
Genus
Rahnella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Yersiniaceae |
| Genus | Rahnella |
| Species | Rahnella sp. JUb53 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1309988 bp
Thymine Count
1314480 bp
Guanine Count
1425702 bp
Cytosine Count
1413279 bp
Genome Length
5463546 bp
Protein-coding Genes
4785 genes
Non-Coding Genes
275 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase | EC840_101407 | Not Available | Negative | 402929 - 403654 | 25837.0 |
| 4-oxalomesaconate hydratase | EC840_101408 | Not Available | Negative | 403651 - 404397 | 27996.1 |
| lysr family transcriptional regulator of gallate degradation | EC840_101409 | Not Available | Positive | 404673 - 405887 | 43842.6 |
| 3-dehydroquinate dehydratase | EC840_101410 | Not Available | Negative | 405889 - 406329 | 16085.1 |
| putative tim-barrel fold metal-dependent hydrolase | EC840_101411 | Not Available | Negative | 406344 - 407177 | 31282.7 |
| protocatechuate 4,5-dioxygenase alpha subunit /protocatechuate 4,5-dioxygenase beta subunit | EC840_101412 | Not Available | Negative | 407174 - 408436 | 47298.7 |
| benzoate transport | EC840_101413 | Not Available | Negative | 408591 - 409970 | 49532.4 |
| diaminopimelate epimerase | EC840_101414 | Not Available | Negative | 410295 - 411134 | 30057.9 |
| lyda family holin superfamily iii | EC840_101415 | Not Available | Negative | 411479 - 411814 | 11977.2 |
| uncharacterized short protein ybdd (duf466 family) | EC840_101416 | Not Available | Negative | 412122 - 412427 | 11645.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
