Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ynbe family lipoprotein | EDI29_04065 | Not Available | Negative | 897627 - 897857 | 8297.05 |
| ydbh family protein | EDI29_04070 | Not Available | Negative | 897873 - 900464 | 96696.8 |
| pas domain s-box protein | EDI29_04075 | Not Available | Positive | 900837 - 902390 | 56825.4 |
| pas domain-containing protein | EDI29_04080 | Not Available | Positive | 902742 - 904295 | 57040.4 |
| 2-hydroxyacid dehydrogenase | EDI29_04085 | Not Available | Positive | 904414 - 905406 | 36413.8 |
| duf333 domain-containing protein | EDI29_04090 | Not Available | Negative | 905630 - 905920 | 9755.62 |
| hypothetical protein | EDI29_04095 | Not Available | Positive | 906604 - 906876 | 9831.83 |
| hypothetical protein | EDI29_04100 | Not Available | Negative | 907352 - 907720 | 13292.8 |
| trna 2-thiocytidine(32) synthetase ttca | EDI29_04105 | Not Available | Positive | 908017 - 908952 | 35579.9 |
| zinc transporter zntb | EDI29_04110 | Not Available | Negative | 909795 - 910778 | 36553.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
