Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | EDI29_04015 | Not Available | Negative | 882596 - 883174 | 20260.5 |
| mannose-binding protein | EDI29_04020 | Not Available | Negative | 883190 - 884239 | 36660.9 |
| outer membrane usher protein fimd | EDI29_04025 | Not Available | Negative | 884236 - 886866 | 96738.6 |
| fimbrial chaperone protein fimc | EDI29_04030 | Not Available | Negative | 886948 - 887652 | 25199.4 |
| type-1 fimbrial protein subunit a | EDI29_04035 | Not Available | Negative | 887734 - 888285 | 18338.3 |
| type 1 fimbrial protein | EDI29_04040 | Not Available | Positive | 889022 - 889318 | 10338.6 |
| serine protease | EDI29_04045 | Not Available | Positive | 889553 - 890398 | 30671.5 |
| sensor domain-containing phosphodiesterase | EDI29_04050 | Not Available | Positive | 890903 - 892681 | 67013.8 |
| atp-dependent rna helicase hrpa | EDI29_04055 | Not Available | Negative | 892771 - 896658 | 148018.0 |
| fmn-dependent nadh-azoreductase | EDI29_04060 | Not Available | Positive | 896973 - 897578 | 21842.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
