Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDI29_03865 | Not Available | Positive | 847868 - 848149 | 10466.6 |
| transcriptional regulator | EDI29_03870 | Not Available | Negative | 848262 - 848885 | 22375.8 |
| threo-3-hydroxy-l-aspartate ammonia-lyase | EDI29_03875 | Not Available | Positive | 849181 - 850155 | 34765.6 |
| ornithine cyclodeaminase family protein | EDI29_03880 | Not Available | Positive | 850166 - 851107 | 33232.5 |
| dsd1 family plp-dependent enzyme | EDI29_03885 | Not Available | Positive | 851104 - 852246 | 41458.4 |
| osmc family peroxiredoxin | EDI29_03890 | Not Available | Negative | 852350 - 852826 | 17632.7 |
| marr family transcriptional regulator | EDI29_03895 | Not Available | Negative | 852830 - 853351 | 19527.4 |
| eama family transporter | EDI29_03900 | Not Available | Positive | 853414 - 854286 | 31235.3 |
| respiratory nitrate reductase subunit gamma | EDI29_03905 | Not Available | Negative | 854387 - 855076 | 25651.1 |
| nitrate reductase molybdenum cofactor assembly chaperone | EDI29_03910 | Not Available | Negative | 855076 - 855795 | 26703.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
